Middlebury

Difference between revisions of "Free Alternatives to Commerical Software"

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(Standard Software - Public Windows PCs: - added JabRef reference app, edited OpenOffice entry)
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== Standard Software - Public Windows PCs<br>  ==
 
== Standard Software - Public Windows PCs<br>  ==
  
*ActiveState: Perl and TCL -- already can be freely distributed to Windows and Linux.  
+
*ActiveState: Perl and TCL -- already can be freely distributed to Windows and Linux.
*Adobe: Acrobat Reader, Flash Player, Shockwave. -- license to distribute can be obtained from Adobe for both Windows and Linux.<br>  
+
*Adobe: Acrobat Reader, Flash Player, Shockwave. -- license to distribute can be obtained from Adobe for both Windows and Linux.<br>
*'''''Allele A1 -- Test/Wine. free to distribute, Windows/Mac only. May be able to use Wine on Linux.<br>'''''
+
*'''''Allele A1 -- Test/Wine.''''' free to distribute, Windows/Mac only. May be able to use Wine on Linux.
*Artemis -- already free to distribute for Linux, Windows.<br>  
+
*Artemis -- already free to distribute for Linux, Windows.<br>
*'''''Artstor -- Test/Wine + Check with vendor re: distribution (cannot distribute freely ATM). Need to check w/ Artstor if we can do that. No version for Linux -- check Wine.<br>'''''
+
*'''''Artstor -- Test/Wine + Check with vendor re: distribution''''' (cannot distribute freely ATM). Need to check w/ Artstor if we can do that. No version for Linux -- check Wine.
*'''''ATLAS.ti''''' '''''-- Test/Wine. Free trial available. Does not work on Linux. Check Wine. Confirm w/ company if trial can be distributed.'''''<br>
+
*'''''ATLAS.ti''''' -- Test/Wine. Free trial available. Does not work on Linux. Check Wine. Confirm w/ company if trial can be distributed.
*Audacity -- already free for Mac/Win/Linux.  
+
*Audacity -- already free for Mac/Win/Linux.
*Blender -- already free for Mac/Win/Linux.<br>
+
*Blender -- already free for Mac/Win/Linux.
*'''''Charges 2000 -- Test/Wine. May be able to distribute. Does not work on Linux - check wine.'''''<br>
+
*'''''Charges 2000 -- Test/Wine.''''' May be able to distribute. Does not work on Linux - check wine.
*'''''ChemBioDraw -- Alternative needed. Windows only with some Mac apps. Commercial. May be able to work with Wine but cannot be distributed freely.&nbsp;<br>'''''
+
*'''''ChemBioDraw -- Alternative needed.''''' Windows only with some Mac apps. Commercial. May be able to work with Wine but cannot be distributed freely.
*CMAP Tools -- free. Win/Linux.  
+
*CMAP Tools -- free. Win/Linux.
*Cn-3D (NCBI) -- free Win/Mac/Linux.  
+
*Cn-3D (NCBI) -- free Win/Mac/Linux.
*DAO -- bundled with XP SP3 and above, windows only, but if apps don't run on windows, not needed.<br>  
+
*DAO -- bundled with XP SP3 and above, windows only, but if apps don't run on windows, not needed.<br>
*'''''Data Desk -- Alternative needed. Win/Mac. commercial<br>'''''
+
*'''''Data Desk -- Alternative needed.''''' Win/Mac. commercial.
*DL Recorder -- Windows only. Alternative: Audacity.<br>  
+
*DL Recorder -- Windows only. Alternative: Audacity.<br>
*'''''EndNote -- Test Alternative.&nbsp;<br>a) RefWorks (we have an institutional subscription; see http://go.middlebury.edu/refworks?midd) -- Windows/Mac only. Cannot distribute freely.<br>b)&nbsp;EndNoteWeb (Middlebury College students and faculty may use EndNote Web by creating an ISI Web of Knowledge account at [http://go.middlebury.edu/wos ISI Web of Knowledge])<br>c)&nbsp;Zotero (Firefox plugin described here http://www.zotero.org/)<br>'''''
+
*'''''EndNote -- Alternatives exist''''': some are web-based subscriptions, some are open-source programs.
*'''''EViews -- Alternative needed.<br>'''''  
+
*# RefWorks (we have an institutional subscription; see http://go.middlebury.edu/refworks?midd) -- Windows/Mac only. Cannot distribute freely.
*'''''Express (USA&nbsp;Express) -- Test/Wine. Free. Need to see if it works with Wine.<br>'''''
+
*# EndNoteWeb (Middlebury College students and faculty may use EndNote Web by creating an ISI Web of Knowledge account at [http://go.middlebury.edu/wos ISI Web of Knowledge])
*'''''FatePC&nbsp;???<br>'''''  
+
*# Zotero - Firefox plugin for any OS. WARNING: Compatibility problems with EndNote import / export. Described here: http://www.zotero.org/
*'''''FTS (Financial Trading System) -- Alternative needed. May be able to emulate in DOSBox but cannot distribute freely.<br>'''''  
+
*# JabRef - Java-based reference database for Win/Mac/Linux. Stores references in the popular and common BibTeX format. Similar layout to EndNote. WARNING: Compatibility problems with Endnote import / export. Learn more here: http://jabref.sourceforge.net/
*'''''GenMAPP. Alternative available - evaluate. may be free/open source, though created with visualbasic. May be able to run with Wine. A Java-based alternative is available. Need to evaluate.&nbsp;http://www.genmapp.org/FAQ2.html#mac<br>'''''
+
*'''''EViews -- Alternative needed.<br>'''''
*'''''Geometer's Sketchpad -- Alternative needed. Win/Mac. Commercial.<br>'''''
+
*'''''Express (USA&nbsp;Express) -- Test/Wine.''''' Free. Need to see if it works with Wine.
*'''''GeoSim -- Test/Wine. may be free to distribute. Windows only. May be able to run under Wine.<br>'''''
+
*'''''FatePC&nbsp;???<br>'''''
*Gnuplot -- free. Win/Linux.  
+
*'''''FTS (Financial Trading System) -- Alternative needed.''''' May be able to emulate in DOSBox but cannot distribute freely.
*Google Earth -- free. Win/Mac/Linux  
+
*'''''GenMAPP. Alternative available - evaluate.''''' may be free/open source, though created with visualbasic. May be able to run with Wine. A Java-based alternative is available. Need to evaluate.&nbsp;http://www.genmapp.org/FAQ2.html#mac
*GS View -- free. Win/Linux.  
+
*'''''Geometer's Sketchpad -- Alternative needed.''''' Win/Mac. Commercial.
*Hyperion Interactive Web Client (plugin) -- not needed for courses, though Linux version exists. May be able to distribute client software, but not really needed ATM.<br>  
+
*'''''GeoSim -- Test/Wine.''''' may be free to distribute. Windows only. May be able to run under Wine.
*'''''IGOR Pro -- Alternative needed. Win/Mac. Commercial.<br>'''''  
+
*Gnuplot -- free. Win/Linux.
*'''''iTunes and QuickTime -- Test/Wine OR Alternative needed. Win/Mac. Free - may be able to distribute, need to check with vendor.&nbsp;<br>'''''
+
*Google Earth -- free. Win/Mac/Linux
*Language School Software Pack (see&nbsp;[[#Language_Support_Software|#Language_Support_Software]]&nbsp;below).<br>  
+
*GS View -- free. Win/Linux.
*'''''Maple -- Alternative needed. Runs on Linux but is commercial.<br>'''''
+
*Hyperion Interactive Web Client (plugin) -- not needed for courses, though Linux version exists. May be able to distribute client software, but not really needed ATM.<br>
*'''''Mathematica -- Alternative needed. Runs on Linux but is commercial.&nbsp;<br>'''''
+
*'''''IGOR Pro -- Alternative needed.''''' Win/Mac. Commercial.
*'''''MathType -- Alternative found. Evaluate. OpenOffice has an equation editor. Scientists tend to use LaTeX.<br>'''''
+
*'''''iTunes and QuickTime -- Test/Wine OR Alternative needed.''''' Win/Mac. Free - may be able to distribute, need to check with vendor.
*'''''MDL Chime -- Test/Wine. Check with vendor re: licensing. Commercial, but may be able to distribute.&nbsp;http://ariadne.mse.uiuc.edu/Info/Chime/chime_linux.html<br>'''''
+
*Language School Software Pack (see&nbsp;[[#Language_Support_Software|#Language_Support_Software]]&nbsp;below).<br>
*'''''MestReC -- Alternative needed. Runs on Linux but is commercial.<br>'''''
+
*'''''Maple -- Alternative needed.''''' Runs on Linux but is commercial.
*'''''Microsoft Office'''''<i>'''&nbsp;-- Alternative found. Evaluate. Open Office.<br>'''</i>
+
*'''''Mathematica -- Alternative needed.''''' Runs on Linux but is commercial.
*'''''Mike's Bikes&nbsp;????<br>'''''  
+
*'''''MathType -- Alternative found.''''' Evaluate. OpenOffice has an equation editor. Scientists tend to use LaTeX.
*'''''MPEG Streamclip -- Test/Wine. Can distribute freely. Also see alternatives:&nbsp;http://en.wikipedia.org/wiki/List_of_video_editing_software.<br>'''''
+
*'''''MDL Chime -- Test/Wine.''''' Check with vendor re: licensing. Commercial, but may be able to distribute.&nbsp;http://ariadne.mse.uiuc.edu/Info/Chime/chime_linux.html
*NetLogo -- free and runs on Win/Mac/Linux.  
+
*'''''MestReC -- Alternative needed.''''' Runs on Linux but is commercial.
*Nvu -- free and runs on Win/Mac/Linux.<br>  
+
*'''''Microsoft Office -- Alternative found.''''' OpenOffice (http://openoffice.org) - robust & stable office suite, most Office features, can load & save MS Office file formats, very similar to Office 2003 in layout & functionality.
*'''''OCR Software&nbsp;'''''<i>'''-- Alternative found. Evaluate. See&nbsp;http://www.google.com/search?sourceid=chrome&amp;ie=UTF-8&amp;q=linux+ocr &nbsp;AND search tesseract GUI linux.<br>'''</i>
+
** Strengths of OpenOffice over MS Office: better support for style-based formatting, "save to PDF" feature included by default, better auto-recover documents.
*OpenBabel. Free. Win/Mac/Linux.  
+
** Weaknesses: no new shiny layout, formats .doc files imperfectly, some advanced features missing.
*OpenPerl IDE. Free. Win. For Linux see Eclipse, jEdit.<br>  
+
*'''''Mike's Bikes&nbsp;????<br>'''''
*'''OR Tutor&nbsp;???<br>'''  
+
*'''''MPEG Streamclip -- Test/Wine.''''' Can distribute freely. Also see alternatives:&nbsp;http://en.wikipedia.org/wiki/List_of_video_editing_software.
*'''''PCGets. Need alternative.&nbsp;Commerical. Win/Linux. If it's a must, see Wine for emulation.&nbsp;http://www.doornik.com/products.html<br>'''''
+
*NetLogo -- free and runs on Win/Mac/Linux.
*'''''PC-ORD. Need alternative.Commercial. Win. If it's a must, see Wine for emulation.'''''<br>
+
*Nvu -- free and runs on Win/Mac/Linux.<br>
*PDF Creator. Can be done via Cups in Linux and PDF creation is supported on Mac out of the box.<br>  
+
*'''''OCR Software&nbsp;'''''-- Alternative found. Evaluate. See&nbsp;http://www.google.com/search?sourceid=chrome&amp;ie=UTF-8&amp;q=linux+ocr &nbsp;AND search tesseract GUI linux.
*'''''PopCycle. Test/Wine. Free. May be able to distribute. Check with the author.&nbsp;http://faculty.washington.edu/herronjc/SoftwareFolder/PopCycle.html<br>'''''  
+
*OpenBabel. Free. Win/Mac/Linux.
*'''''Protein Explorer. Alternative found. Windows only. See alternative at&nbsp;http://www.umass.edu/microbio/chime/pe_beta/pe/protexpl/<br>'''''
+
*OpenPerl IDE. Free. Win. For Linux see Eclipse, jEdit.<br>
*Putty -- ssh is built-in Linux and Mac, not needed.  
+
*'''OR Tutor&nbsp;???<br>'''
*Python -- free Win/Mac/Linux.  
+
*'''''PCGets. Need alternative.''''' Commerical. Win/Linux. If it's a must, see Wine for emulation.&nbsp;http://www.doornik.com/products.html
*R - Win/Mac/Linux. Free.  
+
*'''''PC-ORD. Need alternative.''''' Commercial. Win. If it's a must, see Wine for emulation.
*RasMol - Java based. Win/Mac/Linux. Free&nbsp;  
+
*PDF Creator. Can be done via Cups in Linux and PDF creation is supported on Mac out of the box.<br>
*SciFinder Scholar - web based, can distribute.<br>  
+
*'''''PopCycle - Test/Wine.''''' Free. May be able to distribute. Check with the author.&nbsp;http://faculty.washington.edu/herronjc/SoftwareFolder/PopCycle.html
*'''''Second Life. Test/Wine. Win/Mac. Free, but closed-source. Need to check with vendor if we can distribute it.<br>'''''
+
*'''''Protein Explorer - Alternative found.''''' Windows only. See alternative at&nbsp;http://www.umass.edu/microbio/chime/pe_beta/pe/protexpl/
*'''''SPSS 16. Alternative found. Win/Mac/Linux. Commercial. Need to test alternative: PSPP (http://www.gnu.org/software/pspp/)<br>'''''
+
*Putty -- ssh is built-in Linux and Mac, not needed.
*'''''Stata SE. Need alternative.&nbsp;Win/Mac/Linux. Commercial. Can be run via terminal services - consider.<br>'''''
+
*Python -- free Win/Mac/Linux.
*Stellarium. Win/Mac/Linux. Open Source.<br>  
+
*R - Win/Mac/Linux. Free.
*'''''Swiss PDB Viewer - Test/Wine. Win/Mac.&nbsp;http://spdbv.vital-it.ch/wine.html<br>'''''
+
*RasMol - Java based. Win/Mac/Linux. Free&nbsp;
*'''''TeXnic Center -- Alternative found. Kile and teTeX.&nbsp;http://www.ces.clemson.edu/linux/latex.shtml#kile<br>'''''
+
*SciFinder Scholar - web based, can distribute.<br>
*'''''Viewer Lite (Accelersys) -- Alternative needed. One option is jMol. See&nbsp;http://mailman.ic.ac.uk/pipermail/chemweb/2003-May/001402.html<br>'''''
+
*'''''Second Life. Test/Wine.''''' Win/Mac. Free, but closed-source. Need to check with vendor if we can distribute it.
*Vim. Win/Mac/Linix - open source.  
+
*'''''SPSS 16. Alternative found.''''' Win/Mac/Linux. Commercial. Need to test alternative: PSPP (http://www.gnu.org/software/pspp/)
*VMD.&nbsp;Win/Mac/Linix - open source.  
+
*'''''Stata SE. Need alternative.''''' Win/Mac/Linux. Commercial. Can be run via terminal services - consider.
*WinEdt - just use Kile or teTeX.<br>  
+
*Stellarium. Win/Mac/Linux. Open Source.<br>
*'''''WinHaze -- Test/Wine.&nbsp;http://vista.cira.colostate.edu/improve/Tools/win_haze.htm'''''<br>
+
*'''''Swiss PDB Viewer - Test/Wine.''''' Win/Mac.&nbsp;http://spdbv.vital-it.ch/wine.html
*WinSCP. Just use FileZilla for Linux.<br>
+
*'''''TeXnic Center -- Alternative found.''''' Kile and teTeX.&nbsp;http://www.ces.clemson.edu/linux/latex.shtml#kile
*'''''Write-N-Cite -- Alternative found. Lots of alternatives. See&nbsp;http://en.wikipedia.org/wiki/Comparison_of_reference_management_software<br>'''''
+
*'''''Viewer Lite (Accelersys) -- Alternative needed.''''' One option is jMol. See&nbsp;http://mailman.ic.ac.uk/pipermail/chemweb/2003-May/001402.html
 +
*Vim. Win/Mac/Linix - open source.
 +
*VMD.&nbsp;Win/Mac/Linix - open source.
 +
*WinEdt - just use Kile or teTeX.<br>
 +
*'''''WinHaze -- Test/Wine.''''' http://vista.cira.colostate.edu/improve/Tools/win_haze.htm
 +
*WinSCP. Just use FileZilla for Linux.<br>
 +
*'''''Write-N-Cite -- Alternative found.''''' Lots of alternatives. See&nbsp;http://en.wikipedia.org/wiki/Comparison_of_reference_management_software
 
*Xming -- X is at the core of most Linux distros.
 
*Xming -- X is at the core of most Linux distros.
  

Revision as of 10:27, 25 June 2010

Standard Software - Public Windows PCs

  • ActiveState: Perl and TCL -- already can be freely distributed to Windows and Linux.
  • Adobe: Acrobat Reader, Flash Player, Shockwave. -- license to distribute can be obtained from Adobe for both Windows and Linux.
  • Allele A1 -- Test/Wine. free to distribute, Windows/Mac only. May be able to use Wine on Linux.
  • Artemis -- already free to distribute for Linux, Windows.
  • Artstor -- Test/Wine + Check with vendor re: distribution (cannot distribute freely ATM). Need to check w/ Artstor if we can do that. No version for Linux -- check Wine.
  • ATLAS.ti -- Test/Wine. Free trial available. Does not work on Linux. Check Wine. Confirm w/ company if trial can be distributed.
  • Audacity -- already free for Mac/Win/Linux.
  • Blender -- already free for Mac/Win/Linux.
  • Charges 2000 -- Test/Wine. May be able to distribute. Does not work on Linux - check wine.
  • ChemBioDraw -- Alternative needed. Windows only with some Mac apps. Commercial. May be able to work with Wine but cannot be distributed freely.
  • CMAP Tools -- free. Win/Linux.
  • Cn-3D (NCBI) -- free Win/Mac/Linux.
  • DAO -- bundled with XP SP3 and above, windows only, but if apps don't run on windows, not needed.
  • Data Desk -- Alternative needed. Win/Mac. commercial.
  • DL Recorder -- Windows only. Alternative: Audacity.
  • EndNote -- Alternatives exist: some are web-based subscriptions, some are open-source programs.
    1. RefWorks (we have an institutional subscription; see http://go.middlebury.edu/refworks?midd) -- Windows/Mac only. Cannot distribute freely.
    2. EndNoteWeb (Middlebury College students and faculty may use EndNote Web by creating an ISI Web of Knowledge account at ISI Web of Knowledge)
    3. Zotero - Firefox plugin for any OS. WARNING: Compatibility problems with EndNote import / export. Described here: http://www.zotero.org/
    4. JabRef - Java-based reference database for Win/Mac/Linux. Stores references in the popular and common BibTeX format. Similar layout to EndNote. WARNING: Compatibility problems with Endnote import / export. Learn more here: http://jabref.sourceforge.net/
  • EViews -- Alternative needed.
  • Express (USA Express) -- Test/Wine. Free. Need to see if it works with Wine.
  • FatePC ???
  • FTS (Financial Trading System) -- Alternative needed. May be able to emulate in DOSBox but cannot distribute freely.
  • GenMAPP. Alternative available - evaluate. may be free/open source, though created with visualbasic. May be able to run with Wine. A Java-based alternative is available. Need to evaluate. http://www.genmapp.org/FAQ2.html#mac
  • Geometer's Sketchpad -- Alternative needed. Win/Mac. Commercial.
  • GeoSim -- Test/Wine. may be free to distribute. Windows only. May be able to run under Wine.
  • Gnuplot -- free. Win/Linux.
  • Google Earth -- free. Win/Mac/Linux
  • GS View -- free. Win/Linux.
  • Hyperion Interactive Web Client (plugin) -- not needed for courses, though Linux version exists. May be able to distribute client software, but not really needed ATM.
  • IGOR Pro -- Alternative needed. Win/Mac. Commercial.
  • iTunes and QuickTime -- Test/Wine OR Alternative needed. Win/Mac. Free - may be able to distribute, need to check with vendor.
  • Language School Software Pack (see #Language_Support_Software below).
  • Maple -- Alternative needed. Runs on Linux but is commercial.
  • Mathematica -- Alternative needed. Runs on Linux but is commercial.
  • MathType -- Alternative found. Evaluate. OpenOffice has an equation editor. Scientists tend to use LaTeX.
  • MDL Chime -- Test/Wine. Check with vendor re: licensing. Commercial, but may be able to distribute. http://ariadne.mse.uiuc.edu/Info/Chime/chime_linux.html
  • MestReC -- Alternative needed. Runs on Linux but is commercial.
  • Microsoft Office -- Alternative found. OpenOffice (http://openoffice.org) - robust & stable office suite, most Office features, can load & save MS Office file formats, very similar to Office 2003 in layout & functionality.
    • Strengths of OpenOffice over MS Office: better support for style-based formatting, "save to PDF" feature included by default, better auto-recover documents.
    • Weaknesses: no new shiny layout, formats .doc files imperfectly, some advanced features missing.
  • Mike's Bikes ????
  • MPEG Streamclip -- Test/Wine. Can distribute freely. Also see alternatives: http://en.wikipedia.org/wiki/List_of_video_editing_software.
  • NetLogo -- free and runs on Win/Mac/Linux.
  • Nvu -- free and runs on Win/Mac/Linux.
  • OCR Software -- Alternative found. Evaluate. See http://www.google.com/search?sourceid=chrome&ie=UTF-8&q=linux+ocr  AND search tesseract GUI linux.
  • OpenBabel. Free. Win/Mac/Linux.
  • OpenPerl IDE. Free. Win. For Linux see Eclipse, jEdit.
  • OR Tutor ???
  • PCGets. Need alternative. Commerical. Win/Linux. If it's a must, see Wine for emulation. http://www.doornik.com/products.html
  • PC-ORD. Need alternative. Commercial. Win. If it's a must, see Wine for emulation.
  • PDF Creator. Can be done via Cups in Linux and PDF creation is supported on Mac out of the box.
  • PopCycle - Test/Wine. Free. May be able to distribute. Check with the author. http://faculty.washington.edu/herronjc/SoftwareFolder/PopCycle.html
  • Protein Explorer - Alternative found. Windows only. See alternative at http://www.umass.edu/microbio/chime/pe_beta/pe/protexpl/
  • Putty -- ssh is built-in Linux and Mac, not needed.
  • Python -- free Win/Mac/Linux.
  • R - Win/Mac/Linux. Free.
  • RasMol - Java based. Win/Mac/Linux. Free 
  • SciFinder Scholar - web based, can distribute.
  • Second Life. Test/Wine. Win/Mac. Free, but closed-source. Need to check with vendor if we can distribute it.
  • SPSS 16. Alternative found. Win/Mac/Linux. Commercial. Need to test alternative: PSPP (http://www.gnu.org/software/pspp/)
  • Stata SE. Need alternative. Win/Mac/Linux. Commercial. Can be run via terminal services - consider.
  • Stellarium. Win/Mac/Linux. Open Source.
  • Swiss PDB Viewer - Test/Wine. Win/Mac. http://spdbv.vital-it.ch/wine.html
  • TeXnic Center -- Alternative found. Kile and teTeX. http://www.ces.clemson.edu/linux/latex.shtml#kile
  • Viewer Lite (Accelersys) -- Alternative needed. One option is jMol. See http://mailman.ic.ac.uk/pipermail/chemweb/2003-May/001402.html
  • Vim. Win/Mac/Linix - open source.
  • VMD. Win/Mac/Linix - open source.
  • WinEdt - just use Kile or teTeX.
  • WinHaze -- Test/Wine. http://vista.cira.colostate.edu/improve/Tools/win_haze.htm
  • WinSCP. Just use FileZilla for Linux.
  • Write-N-Cite -- Alternative found. Lots of alternatives. See http://en.wikipedia.org/wiki/Comparison_of_reference_management_software
  • Xming -- X is at the core of most Linux distros.

Standard Software - Public Macintosh Computers

The following software is standard (available) across ALL of our Public Macintosh Computers. The software applications that are most popular are outlined in bold.

Language Support Software

Standard Computer Classrooms and Labs

The following computer classrooms/labs have only the standard software outlined above:

  • Music Library Carrels
  • Main Library Carrels
  • RAJ

Specialized Computer Classrooms and Labs

In addition to the standard software bundle, the following computer classrooms and labs have specialized software. Locations with Macs are shaded.

Software Alternatives
Adobe Acrobat Pro 9 Combination of cups-pdf, OpenOffice and web-based forms via Drupal or Google Docs. Regarding wine integration: http://appdb.winehq.org/appview.php?appId=847
Adobe Bridge CS4 Digikam, GTKam, F-spot, Rawstudio, Gimp with raw plugins, http://ksvichaar.blogspot.com/2007/06/camera-raw-editors-for-linux.html
http://www.linux.com/archive/feed/56128
Adobe Dreamweaver CS4 Nvu
Adobe Flash Pro CS4 None that are equivalent. Some options: Mainly: http://www.openlaszlo.org/

Others:
http://f4l.sourceforge.net/, http://www.ktoon.net/, http://www.pencil-animation.org/, http://www.salasaga.org/

See also:
http://osflash.org/linux

Libraries and CLI tools: http://www.m2osw.com/sswf.html, http://swfmill.org/, http://www.swftools.org/, http://www.libming.org/

Related notes:
http://www.williambrownstreet.net/wordpress/?p=78
http://ntt.cc/2008/05/19/using-actionscript-3-to-develop-adobe-flash-content-on-linux.html

Adobe Illustrator CS4 Primarily http://www.inkscape.org/. Also http://www.xaraxtreme.org/ and http://www.skencil.org/
Adobe Indesign CS4 Primarily http://www.scribus.net/
Adobe Photoshop CS4^ http://www.gimp.org/ and http://www.gimpshop.com/
Use http://www.xnview.com/ for resizing, basic retouching, conversion.

Alternative to MS Paint: gpaint.

ArcGIS
Brainstorm
Cinematize  
DataStudio
DeltaGraph
DVD Studio Pro
E-Prime
FontLab
Final Cut Pro
Final Cut Express
Google Earth PRO  
Graphing Calculator  
Kaleida Graph
Logic Works
Mathcad  
Matlab
Minitab  
Multisim
Shazam
Soundtrack Pro
Spartan 08
StatTransfer
Stella


^ Adobe ImageReady has been discontinued by Adobe.

Main Sources for Free Alternatives to Commercial Software